Dr. Shrinivasrao Peerajirao Mane
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Dr. Shrinivasrao Peerajirao Mane

Research Scientist
Virginia Bioinformatics Institute, USA


Highest Degree
Ph.D. in Plant Physiology from Virginia Tech University, USA

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Area of Interest:

Plant and Soil Sciences
100%
Plant Genetics
62%
Plant Breeding
90%
Bioinformatics
75%
Plant Physiology
55%

Research Publications in Numbers

Books
0
Chapters
0
Articles
17
Abstracts
0

Selected Publications

  1. Mane, S.P., M.G. Dominguez-Bello, M.J. Blaser, B.W. Sobral and R. Hontecillas et al., 2010. Host-interactive genes in amerindian Helicobacter pylori diverge from their old world homologs and mediate inflammatory responses. J. Bacteriol., 192: 3078-3092.
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  2. Mane, S.P., C. Evans, K. Cooper, O. Crasta and O. Folkerts et al., 2009. Transcriptome sequencing of the Microarray Quality Control (MAQC) RNA reference samples using next generation sequencing. BMC Genomics, 10: 264-264.
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  3. Vasquez-Robinet, C., S.P. Mane, A. Ulanov, J.I. Watkinson and V.K. Stromberg et al., 2008. Physiological and molecular adaptations to drought in andean potato genotypes. J. Exp. Bot., 59: 2109-2123.
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  4. Peccoud, J., M.F. Blauvelt, Y. Cai, K.L. Cooper and O. Crasta et al., 2008. Targeted development of registries of biological parts. PLoS One, 3: e2671-e2671.
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  5. Mane, S.P., C.V. Robinet, A. Ulanov, R. Schafleitner and L. Tincopa et al., 2008. Molecular and physiological adaptation to prolonged drought stress in the leaves of two Andean potato genotypes. Functional Plant Biol., 35: 669-688.
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  6. Crasta, O.R., O. Folkerts, Z. Fei, S.P. Mane and C. Evans et al., 2008. Genome sequence of Brucella abortus vaccine strain S19 compared to virulent strains yields candidate virulence genes. PLoS One, 3: 2193-2193.
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  7. Yu, G.X., E.E. Snyder S.M.Boyle, O.R. Crasta and M. Czar et al., 2007. A versatile computational pipeline for bacterial genome annotation improvement and comparative analysis, with Brucella as a use case. Nucl. Acids Res., 35: 3953-3962.
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  8. Snyder, E.E., N. Kampanya, J. Lu, E.K. Nordberg et al., 2007. PATRIC: the VBI pathosystems resource integration center. Nucl. Acids Res., 35: D401-D406.
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  9. Saha, N., L.T. Watson, K. Kafadar, N. Ramakrishnan, A. Onufriev, S.P. Mane and C. Vasquez-Robinet, 2007. Validation and estimation of parameters for a general probabilistic model of the PCR process. J. Comput. Biol., 14: 97-112.
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  10. Mane, S.P., C. Vasquez-Robinet, A.A. Sioson, L.S. Heath and R. Grene, 2007. Early PLD α-mediated events in response to progressive drought stress in Arabidopsis: A transcriptome analysis. J. Exp. Bot., 58: 241-252.
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  11. Sioson, A.A., S.P. Mane, P. Li, W. Sha, L.S. Heath, H.J. Bohnert and R. Grene, 2006. The statistics of identifying differentially expressed genes in Expresso and TM 4: A comparison. BMC Bioinformatics, 7: 215-215.
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  12. Nagabhushana, K., S.P. Mane, M.G. Vaishali, H.E. Shashidhar and S. Hittalmani, 2006. Detection and localization of main effect of QTLs for growth and yield traits in double haploid lines of rice. Oryza, 43: 1-4.
    Direct Link  |  
  13. Nagabhushana, K., S.P. Mane and S. Hittalmani, 2006. Comparative studies on QTL mapping by simple interval mapping and composite interval mapping models for selected growth and yield traits in rice (Oryza sativa L.). Indian J. Crop Sci., 1: 1-2.
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  14. Li, P., S.P. Mane, A.A. Sioson, C.V. Robinet, L.S. Heath, H.J. Bohnert and R. Grene, 2006. Effects of chronic ozone exposure on gene expression in Arabidopsis thaliana ecotypes and in Thellungiella halophila. Plant Cell Environ., 29: 854-868.
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  15. Li, P., A. Sioson, S.P. Mane, A. Ulanov and G. Grothaus et al., 2006. Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field. Plant Mole. Biol., 62: 593-609.
    CrossRef  |  Direct Link  |  
  16. Kanbar, A.S., H.E. Shashidhar and S.P. Mane, 2005. Genetic variability of root morphology and related traits in an indica-indica based mapping population of rice (Oryza sativa L.). Res. Crops, 6: 539-541.
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  17. Mane, S.P., A.S. Kanbar, S. Hittalmani and H.E. Shashidhar, 2003. Molecular marker analysis of root length in a diverse germplasm in rice (Oryza sativa L.). Indian J. Genet. Plant Breed., 63: 197-201.
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