Dr. Ibrokhim Abdurakhmonov
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Dr. Ibrokhim Abdurakhmonov

Professor
Center of Genomics and Bioinformatics, Uzbekistan


Highest Degree
D.Sc. in Genetics from Institute of Genetics and Plant Experimental Biology, Uzbekistan

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Biography

Ibrokhim Y. Abdurakhmonov received his B.S. (1997) in biotechnology from the National University, M.S. in plant breeding (2001) from Texas A&M University of USA, PhD (2002) in molecular genetics, Doctor of Science (2009) in genetics, and full professorship (2011) in molecular genetics and molecular biotechnology from Academy of Sciences of Uzbekistan. He founded (2012) the Center of Genomics and B

Area of Interest:

Plant Genetic Engineering
100%
Abiotic Stress
62%
Molecular Markers
90%
Genetic Diversity
75%
Marker Assisted Breeding
55%

Research Publications in Numbers

Books
0
Chapters
0
Articles
107
Abstracts
0

Selected Publications

  1. Darmanov, M.M., A.K. Makamov, M.S. Ayubov, N.N. Khusenov and Z.T. Buriev et al., 2022. Development of superior fibre quality upland cotton cultivar series ‘Ravnaq’ using marker-assisted selection. Front. Plant Sci., Vol. 13. 10.3389/fpls.2022.906472.
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  2. Dai, L., L. Gao, L. Tao, S.R. Hadinegoro and M. Erkin et al., 2022. Efficacy and safety of the RBD-dimer-based Covid-19 vaccine ZF2001 in adults. N. Engl. J. Med., 386: 2097-2111.
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  3. Kushanov, F.N., O.S. Turaev, D.K. Ernazarova, B.M. Gapparov and B.B. Oripova et al., 2021. Genetic diversity, QTL mapping, and marker-assisted selection technology in cotton (Gossypium spp.). Front. Plant Sci., Vol. 12. 10.3389/fpls.2021.779386.
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  4. Ayubov, M.S., T.M. Norov, S. Saha, T.M. Tseng and K.R. Reddy et al., 2021. Alteration of root and shoot morphologies by interspecific replacement of individual upland cotton chromosome or chromosome segment pairs. Euphytica, Vol. 217. 10.1007/s10681-021-02771-6.
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  5. Ayubov, M.S., M.H. Mirzakhmedov, V.R. Sripathi, Z.T. Buriev and K.A. Ubaydullaeva et al., 2019. Role of MicroRNAs and small RNAs in regulation of developmental processes and agronomic traits in Gossypium species. Genomics, 111: 1018-1025.
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  6. Shapulatov, U., M. van Hoogdalem, M. Schreuder, H. Bouwmeester, I.Y. Abdurakhmonov and A.R. van der Krol, 2018. Functional intron-derived miRNAs and host-gene expression in plants. Plant Methods, Vol. 14. 10.1186/s13007-018-0351-2.
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  7. Mammadov, J., R. Buyyarapu, S.K. Guttikonda, K. Parliament, I.Y. Abdurakhmonov and S.P. Kumpatla, 2018. Wild relatives of maize, rice, cotton, and soybean: Treasure troves for tolerance to biotic and abiotic stresses. Front. Plant Sci., Vol. 9. 10.3389/fpls.2018.00886.
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  8. Hsu, C.Y., M.A. Arick, Q. Miao, S. Saha and J.N. Jenkins et al., 2018. Transcriptome analysis of ten days post anthesis elongating fiber in the upland cotton (Gossypium hirsutum) chromosome substitution line CS-B25. Am. J. Plant Sci., 9: 1334-1361.
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  9. Miao, Q., P. Deng, S. Saha, J.N. Jenkins and C.Y. Hsu et al., 2017. Transcriptome analysis of Ten-DPA fiber in an upland cotton (Gossypium hirsutum) Line with improved fiber traits from phytochrome A1 RNAi plants. Am. J. Plant Sci., 8: 2530-2553.
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  10. Kushanov, F.N., Z.T. Buriev, S.E. Shermatov, O.S. Turaev and T.M. Norov et al., 2017. QTL mapping for flowering-time and photoperiod insensitivity of cotton Gossypium darwinii Watt. PLoS ONE, Vol. 12. 10.1371/journal.pone.0186240.
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  11. Geng, L., D.D. Deng, M.J. Wubben, J.N. Jenkins, J.C. McCarty and I. Abdurakhmonov, 2017. A high-throughput standard PCR-based genotyping method for determining transgene zygosity in segregating plant populations. Front. Plant Sci., Vol. 8. 10.3389/fpls.2017.01252.
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  12. Kushanov, F.N., A.E. Pepper, J.Z. Yu, Z.T. Buriev and S.E. Shermatov et al., 2016. Development, genetic mapping and QTL association of cotton PHYA, PHYB, and HY5-specific CAPS and dCAPS markers. BMC Genet, Vol. 17. 10.1186/s12863-016-0448-4.
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  13. Shapulatov, U.M., Z.T. Buriev, M. Ulloa, S. Saha and E.J. Devor et al., 2015. Characterization of small RNAs and their targets from Fusarium oxysporum infected and non-infected cotton root tissues. Plant Mol. Biol. 10.1007/s11105-015-0945-z.
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  14. Saha, S., D.M. Stelly, A.K. Makamov, M.S. Ayubov and D. Raska et al., 2015. Molecular confirmation of Gossypium hirsutum chromosome substitution lines. Euphytica. 10.1007/s10681-015-1407-2.
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  15. Abdurakhmonov, I.Y., M.S. Ayubov, K.A. Ubaydullaeva, Z.T. Buriev and S.E. Shermatov et al., 2015. RNA interference for functional genomics and improvement of cotton (Gossypium sp.). Frontier Plant Sci., Vol. 7. 10.3389/fpls.2016.00202.
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  16. Abdurakhmonov, I., 2015. Plant Genomics. Intech Publications, Croatia.
  17. Abdullaev, A.A., I.B. Salakhutdinov, S.S. Egamberdiev, Z. K00uryazov and L.A. Glukhova et al., 2015. Analyses of fusarium wilt race 3 resistance in upland cotton (Gossypium hirsutum L.). Genetica, 143: 385-392.
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  18. Egamberdiev, S.S., I.B. Salahutdinov, A.A. Abdullaev, M. Ulloa and S. Saha et al., 2014. Detection of Fusarium oxysporum f. sp. vasinfectum race 3 by single-base extension method and allele-specific polymerase chain reaction. Can. J. Plant Pathol., 36: 216-223.
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  19. Ulloa, M., I.Y. Abdurakhmonov, C. Perez-M, R. Percy and J.M. Stewart, 2013. Genetic diversity and population structure of cotton (Gossypium spp.) of the New World assessed by SSR markers. Botany, 91: 251-259.
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  20. Egamberdiev, S.S., M. Ulloa, S. Saha, I.B. Salakhutdinov and A. Abdullaev et al., 2013. Molecular characterization of Uzbekistan isolates of Fusarium oxysporum f. sp. vasinfectum. J. Plant Sci. Mol. Breed., Vol. 2. 10.7243/2050-2389-2-3.
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  21. Abramatov, M.B., O.O. Amirov, A.E. Kuchboev, I.M. Khalilov and I.Y. Abdurakhmanov, 2013. Morphological and molecular characterization of Haemonchus contortus and H. placei (Nematoda: Trichostrongylidae) from Uzbekistan by sequences of the second internal transcribed spacer of ribosomal DNA. Sci. Parasitol., 14: 115-120.
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  22. Sanamyan, M.F., J.E. Petlyakova, E.A. Sharipova and I.Y. Abdurakhmonov, 2011. Cytogenetic characteristics of new monosomic stocks of cotton (Gossypium hirsutum L.). Genet. Res. Int. 10.4061/2011/273642.
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  23. Mavlonov, G.T., J.M. Lee, H.S. Shin, T.H. Yi and I.Y. Abdurakhmonov, 2011. Low molecular fucoidan and its macromolecular complex with bee venom melittin. Adv. Biosci. Biotechnol., 2: 298-303.
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  24. Abdurakhmonov, I., 2011. Plant Breeding. Intech Publications, Croatia, Europe, Pages: 364.
  25. Sanamyan, M.F., J.E. Petlyakova, E.A. Sharipova and I.Y. Abdurakhmonov, 2010. Morphological characteristics and identification of new monosomic stocks for cotton (Gossypium hirsutum L.). Adv. Biosci. Biotechnol., 1: 372-383.
    Direct Link  |  
  26. Campbell, B.T., S. Saha, R. Percy, J. Frelichowski and J.N. Jenkins et al., 2010. Status of the global cotton germplasm resources. Crop Sci., 50: 1161-1179.
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  27. Buriev, Z.T., S. Saha, I.Y. Abdurakhmonov, J.N. Jenkins, A. Abdukarimov, B.E. Scheffler and D.M. Stelly, 2010. Clustering, haplotype diversity and locations of MIC-3: A unique root-specific defense-related gene family in Upland cotton (Gossypium hirsutum L.). Theoret. Applied Genet., 120: 587-606.
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  28. Abdurakhmonov, I.Y., Z.T. Buriev, C.J. Logan-Young, A. Abdukarimov and A.E. Pepper, 2010. Duplication, divergence and persistence in the Phytochrome photoreceptor gene family of cottons (Gossypium spp.). BMC Plant Biol., Vol. 10. 10.1186/1471-2229-10-119.
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  29. Mavlonov, G.T., I.Y. Abdurakhmonov, A. Abdukarimov, R. Kantety and G.C. Sharma, 2009. The characterization of major proteins expressed in roots of four Gossypium species. J. Cotton Sci., 13: 256-264.
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  30. Devor, E.J., L. Huang, A. Abdukarimov and I.Y. Abdurakhmonov, 2009. Methodologies for in vitro cloning of small RNAs and application for plant genome (s). Int. J. Plant Genomics. 10.1155/2009/915061.
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  31. Devor, E.J., I. Abdurakhmonov, M. Zlojutro, M.P. Millis and J.J. Galbraith et al., 2009. Gene flow at the crossroads of humanity: mtDNA sequence diversity and Alu insertion polymorphism frequencies in Uzbekistan. Open Genomics J., 2: 1-11.
  32. Abdurakhmonov, I.Y., S. Saha, J.N. Jenkins, Z.T. Buriev and S.E. Shermatov et al., 2009. Linkage disequilibrium based association mapping of fiber quality traits in G. hirsutum L. variety germplasm. Genetica, 136: 401-417.
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  33. Mavlonov, G.T., K.A. Ubaidullaeva, M.I. Rakhmanov, I.Y. Abdurakhmonov and A. Abdukarimov, 2008. Chitin-binding antifungal protein from Ficus carica latex. Chem. Nat. Compounds, 44: 216-219.
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  34. Abdurakhmonov, I.Y., R.J. Kohel, J.Z. Yu, A.E. Pepper and A.A. Abdullaev et al., 2008. Molecular diversity and association mapping of fiber quality traits in exotic G. hirsutum L. germplasm. Genomics, 92: 478-487.
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  35. Abdurakhmonov, I.Y., E.J. Devor, Z.T. Buriev, L. Huang and A. Makamov et al., 2008. Small RNA regulation of ovule development in the cotton plant, G. hirsutum L. BMC Plant Biol., Vol. 8. 10.1186/1471-2229-8-93.
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  36. Abdurakhmonov, I.Y. and A. Abdukarimov, 2008. Application of association mapping to understanding the genetic diversity of plant germplasm resources. Int. J. Plant Genomics. 10.1155/2008/574927.
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  37. Chen, Z.J., B.E. Scheffler, E. Dennis, B.A. Triplett and T. Zhang et al., 2007. Toward sequencing cotton (Gossypium) genomes. Plant Physiol., 145: 1303-1310.
  38. Abdurakhmonov, I.Y., Z.T. Buriev, S. Saha, A.E. Pepper and J.A. Musaev et al., 2007. Microsatellite markers associated with lint percentage trait in cotton, Gossypium hirsutum. Euphytica, 156: 141-156.
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  39. Abdurakhmonov, I.Y., F.N. Kushanov, F. Djaniqulov, Z.T. Buriev and A.E. Pepper et al., 2007. The role of induced mutation in conversion of photoperiod dependence in cotton. J. Heredity, 98: 258-266.
  40. Abdurakhmonov, I.Y., A.A. Abdullaev, S. Saha, Z.T. Buriev and D. Arslanov et al., 2005. Simple sequence repeat marker associated with a natural leaf defoliation trait in tetraploid cotton. J. Heredity, 96: 644-653.
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  41. Reddy, O.U.K., A.E. Pepper, I. Abdurakhmonov, S. Saha and J.N. Jenkins et al., 2001. New dinucleotide and trinucleotide microsatellite marker resources for cotton genome research. J. Cotton Sci., 5: 103-113.